1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_5_42060.1

Lsat_1_v5_gn_5_42060.1 (PXL2, MIK1)


Aliases : PXL2, MIK1

Description : not classified


Gene families : OG0000056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_42060.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_140561.1 AtRLP22, RLP22 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005795 Golgi stack IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 754 772
IPR001611 Leu-rich_rpt 647 706
IPR001611 Leu-rich_rpt 961 1016
IPR001611 Leu-rich_rpt 549 608
IPR001611 Leu-rich_rpt 823 883
IPR001611 Leu-rich_rpt 483 539
IPR001611 Leu-rich_rpt 135 194
IPR013210 LRR_N_plant-typ 38 74
No external refs found!