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  5. Lsat_1_v5_gn_5_30040.1

Lsat_1_v5_gn_5_30040.1 (AtGGPPS11, IDS11,...)


Aliases : AtGGPPS11, IDS11, AtLSU, LSU, AtGGPS11, GGPS1, GGPPS11

Description : isoprenyl diphosphate synthase *(IDS). catalytic component *(IDS11) of geranyl diphosphate synthase complex. EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG0001627 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001627_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_30040.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_119


Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015995 chlorophyll biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016744 transketolase or transaldolase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 74 310
No external refs found!