Lsat_1_v5_gn_5_27160.1

Description : not classified

Gene families : OG0018370 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_27160.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_109

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004386	helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005048	signal sequence binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005984	disaccharide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005985	sucrose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006302	double-strand break repair	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006621	protein retention in ER lumen	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006974	DNA damage response	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016157	sucrose synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032507	maintenance of protein location in cell	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045185	maintenance of protein location	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046527	glucosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046923	ER retention sequence binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051651	maintenance of location in cell	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	236	368
IPR025753	AAA_N_dom	37	119

External Links

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Lsat_1_v5_gn_5_27160.1

Expression Profile

Co-expression Networks

Functional Annotation