Lsat_1_v5_gn_5_21081.1 (TPS1, ATTPS1)

Aliases : TPS1, ATTPS1

Description : EC_2.4 glycosyltransferase

Gene families : OG0008652 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_21081.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_87

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0005991	trehalose metabolic process	None	Extended
BP	GO:0005992	trehalose biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009312	oligosaccharide biosynthetic process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046351	disaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016168	chlorophyll binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0017038	protein import	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0034061	DNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001830	Glyco_trans_20	3	133
IPR001830	Glyco_trans_20	199	271
IPR001830	Glyco_trans_20	273	338
IPR003337	Trehalose_PPase	392	503

External Links

No external refs found!

Lsat_1_v5_gn_5_21081.1 (TPS1, ATTPS1)

Expression Profile

Co-expression Networks

Functional Annotation