Lsat_1_v5_gn_5_186040.1 (MCCA)

Aliases : MCCA

Description : subunit alpha of methylcrotonoyl-CoA carboxylase complex. EC_6.4 ligase forming carbon-carbon bond

Gene families : OG0001577 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001577_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_186040.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_170

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005996	monosaccharide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008430	selenium binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016832	aldehyde-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019321	pentose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019566	arabinose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046373	L-arabinose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000089	Biotin_lipoyl	666	731
IPR005481	BC-like_N	44	152
IPR045774	MCCA_BT_dom	499	651
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	157	365
IPR005482	Biotin_COase_C	379	486

External Links

No external refs found!