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  5. Lsat_1_v5_gn_5_15800.1

Lsat_1_v5_gn_5_15800.1 (SIL1, HDAC6, ATHDA6,...)


Aliases : SIL1, HDAC6, ATHDA6, AXE1, RTS1, HDA6, RPD3B

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond. histone deacetylase *(HDA8). component *(HDA6) of histone deacetylation complex. deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex


Gene families : OG0003106 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_15800.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_116


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042586 peptide deformylase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 40 331
No external refs found!