Lsat_1_v5_gn_5_152401.1 (ATL73, DAF)

Aliases : ATL73, DAF

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase

Gene families : OG0017868 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_152401.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_26

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_8_107801.1	DAFL1, ATL72	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	67	110

External Links

No external refs found!