Aliases : IEF
Description : not classified
Gene families : OG0000282 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000282_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_149700.1 | |
Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_87 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Lsat_1_v5_gn_8_137620.1 | No alias | phosphodiesterase *(PIG-O) | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEA | Interproscan |
BP | GO:0006260 | DNA replication | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0005783 | endoplasmic reticulum | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0008037 | cell recognition | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0009579 | thylakoid | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016755 | aminoacyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0017038 | protein import | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0030163 | protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0048544 | recognition of pollen | IEP | Lactuca Sativa GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR015088 | Znf_DNA-dir_DNA_pol_B_alpha | 175 | 232 |
No external refs found! |