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  5. Lsat_1_v5_gn_5_139301.1

Lsat_1_v5_gn_5_139301.1 (AtCHC2, CHC2)


Aliases : AtCHC2, CHC2

Description : EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG0000164 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_139301.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_637


Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEA Interproscan
BP GO:0006694 steroid biosynthetic process IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 189 261
IPR000547 Clathrin_H-chain/VPS_repeat 117 188
IPR002225 3Beta_OHSteriod_DH/Estase 379 442
No external refs found!