Lsat_1_v5_gn_5_133301.1 (ATABCG40, ABCG40,...)

Aliases : ATABCG40, ABCG40, PDR12, ATPDR12

Description : subfamily ABCG transporter

Gene families : OG0000427 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_133301.1

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004857	enzyme inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004860	protein kinase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019210	kinase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140678	molecular function inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR029481	ABC_trans_N	87	144
IPR003439	ABC_transporter-like_ATP-bd	169	352
IPR013581	PDR_assoc	727	782
IPR043926	ABCG_dom	385	438
IPR003439	ABC_transporter-like_ATP-bd	849	1001
IPR013525	ABC2_TM	506	718
IPR013525	ABC2_TM	1146	1333

External Links

No external refs found!

Lsat_1_v5_gn_5_133301.1 (ATABCG40, ABCG40,...)

Expression Profile

Co-expression Networks

Functional Annotation