1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_5_12880.1

Lsat_1_v5_gn_5_12880.1 (PLL19)


Aliases : PLL19

Description : EC_4.2 carbon-oxygen lyase. pectate lyase


Gene families : OG0002929 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002929_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_12880.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_97


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009606 tropism IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002022 Pec_lyase 135 318
No external refs found!