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  5. Lsat_1_v5_gn_5_110861.1

Lsat_1_v5_gn_5_110861.1 (Tudor2, AtTudor2, TSN2)


Aliases : Tudor2, AtTudor2, TSN2

Description : mRNA endoribonuclease *(TSN)


Gene families : OG0000491 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_110861.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_0_12780.1 Tudor1, TSN1, AtTudor1 mRNA endoribonuclease *(TSN) 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_185220.1 AtCPK21, CPK21 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 211 302
No external refs found!