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  5. Lsat_1_v5_gn_5_101961.1

Lsat_1_v5_gn_5_101961.1


Description : not classified


Gene families : OG0018365 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_101961.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_12


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 322 347
IPR002885 Pentatricopeptide_rpt 192 218
IPR002885 Pentatricopeptide_rpt 220 250
IPR002885 Pentatricopeptide_rpt 601 622
IPR002885 Pentatricopeptide_rpt 497 522
IPR002885 Pentatricopeptide_rpt 20 65
IPR002885 Pentatricopeptide_rpt 119 166
IPR002885 Pentatricopeptide_rpt 419 467
IPR002885 Pentatricopeptide_rpt 523 569
No external refs found!