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Aliases : ABCG36, ATABCG36, PEN3, PDR8, ATPDR8
Description : subfamily ABCG transporter
Gene families : OG0000469 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_99441.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_1_118421.1 | ABCG36,... | subfamily ABCG transporter | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_1_119121.1 | ABCG29,... | subfamily ABCG transporter | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_4_120860.1 | ABCG29,... | subfamily ABCG transporter | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| MF | GO:0140359 | ABC-type transporter activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004672 | protein kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006629 | lipid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016301 | kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140299 | small molecule sensor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR043926 | ABCG_dom | 1066 | 1133 |
| IPR043926 | ABCG_dom | 407 | 480 |
| IPR003439 | ABC_transporter-like_ATP-bd | 192 | 374 |
| IPR013581 | PDR_assoc | 745 | 809 |
| IPR029481 | ABC_trans_N | 111 | 167 |
| IPR013525 | ABC2_TM | 1183 | 1284 |
| IPR013525 | ABC2_TM | 1287 | 1367 |
| IPR013525 | ABC2_TM | 528 | 740 |
| IPR003439 | ABC_transporter-like_ATP-bd | 885 | 1037 |
| No external refs found! |