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  5. Lsat_1_v5_gn_4_55580.1

Lsat_1_v5_gn_4_55580.1 (KTN80.2, DWA3)


Aliases : KTN80.2, DWA3

Description : regulatory component *(KTN80) of Katanin ATP-dependent microtubule severing complex


Gene families : OG0001630 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_55580.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_12


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004097 catechol oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR028021 Katanin_C-terminal 604 760
IPR001680 WD40_rpt 134 170
IPR001680 WD40_rpt 227 252
IPR001680 WD40_rpt 174 212
IPR001680 WD40_rpt 92 128
IPR001680 WD40_rpt 50 85
No external refs found!