Lsat_1_v5_gn_4_5521.1 (RPL2.2)

Aliases : RPL2.2

Description : not classified

Gene families : OG0000249 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_5521.1

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005047	signal recognition particle binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005048	signal sequence binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006631	fatty acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008312	7S RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010274	hydrotropism	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0048500	signal recognition particle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_uL2_C	1	54

External Links

No external refs found!

Lsat_1_v5_gn_4_5521.1 (RPL2.2)

Expression Profile

Co-expression Networks

Functional Annotation