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  5. Lsat_1_v5_gn_4_54820.1

Lsat_1_v5_gn_4_54820.1


Description : not classified


Gene families : OG0001749 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_54820.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_159241.1 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009415 response to water IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019915 lipid storage IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001087 GDSL 29 352
No external refs found!