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  5. Lsat_1_v5_gn_4_54780.1

Lsat_1_v5_gn_4_54780.1 (HMGB6)


Aliases : HMGB6

Description : aureusidin synthase


Gene families : OG0003527 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_54780.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_135


Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004619 phosphoglycerate mutase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005747 mitochondrial respiratory chain complex I IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006006 glucose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006007 glucose catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006952 defense response IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030964 NADH dehydrogenase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045271 respiratory chain complex I IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022740 Polyphenol_oxidase_C 460 587
IPR002227 Tyrosinase_Cu-bd 169 377
IPR022739 Polyphenol_oxidase_cen 384 434
No external refs found!