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Description : not classified
Gene families : OG0000117 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_44960.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_149 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_4_45581.1 | NIT3, AtNIT3 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003993 | acid phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006413 | translational initiation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008608 | attachment of spindle microtubules to kinetochore | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022402 | cell cycle process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0031262 | Ndc80 complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046983 | protein dimerization activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140110 | transcription regulator activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0180019 | Knl1/Spc105 complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901681 | sulfur compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |