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  5. Lsat_1_v5_gn_4_26101.1

Lsat_1_v5_gn_4_26101.1


Description : not classified


Gene families : OG0016344 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_26101.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_196


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005247 voltage-gated chloride channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005253 monoatomic anion channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005254 chloride channel activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015108 chloride transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 478 526
IPR002885 Pentatricopeptide_rpt 238 261
IPR002885 Pentatricopeptide_rpt 554 579
IPR002885 Pentatricopeptide_rpt 445 475
IPR002885 Pentatricopeptide_rpt 410 440
IPR002885 Pentatricopeptide_rpt 272 300
IPR002885 Pentatricopeptide_rpt 198 226
No external refs found!