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  5. Lsat_1_v5_gn_4_145280.1

Lsat_1_v5_gn_4_145280.1


Description : EC_4.2 carbon-oxygen lyase. mono-/sesquiterpene-/diterpene synthase


Gene families : OG0003540 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_145280.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_149


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 196 460
IPR001906 Terpene_synth_N 28 165
No external refs found!