Lsat_1_v5_gn_3_99300.1 (NDHJ)

Aliases : NDHJ

Description : component *(NdhJ) of NDH subcomplex A. component *(NdhK) of NDH subcomplex A

Gene families : OG0002371 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002371_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_99300.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_103

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_C0091.00002	NDHJ	component *(NdhJ) of NDH subcomplex A	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0091.00045	NDHJ	component *(NdhJ) of NDH subcomplex A	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEA	Interproscan
MF	GO:0009055	electron transfer activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	IEA	Interproscan
MF	GO:0051540	metal cluster binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006576	biogenic amine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009512	cytochrome b6f complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016168	chlorophyll binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030410	nicotianamine synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030417	nicotianamine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030418	nicotianamine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042401	biogenic amine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072351	tricarboxylic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001268	NADH_UbQ_OxRdtase_30kDa_su	174	292
IPR006137	NADH_UbQ_OxRdtase-like_20kDa	3	71

External Links

No external refs found!

Lsat_1_v5_gn_3_99300.1 (NDHJ)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation