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  5. Lsat_1_v5_gn_3_84460.1

Lsat_1_v5_gn_3_84460.1 (IQD23)


Aliases : IQD23

Description : not classified


Gene families : OG0000060 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_84460.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_159541.1 AHL3 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006825 copper ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035434 copper ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 466 603
No external refs found!