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  5. Lsat_1_v5_gn_3_63520.1

Lsat_1_v5_gn_3_63520.1


Description : not classified


Gene families : OG0000315 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_63520.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_121100.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006013 mannose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015977 carbon fixation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0017038 protein import IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR026992 DIOX_N 2 80
No external refs found!