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  5. Lsat_1_v5_gn_3_45840.1

Lsat_1_v5_gn_3_45840.1


Description : not classified


Gene families : OG0005244 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_45840.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_45801.1 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008987 quinolinate synthetase A activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009435 NAD biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019674 NAD metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031179 peptide modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR023631 Amidase_dom 45 453
No external refs found!