1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_3_42540.1

Lsat_1_v5_gn_3_42540.1 (MEF22)


Aliases : MEF22

Description : RNA editing factor *(MEF22)


Gene families : OG0005023 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_42540.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_340


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 531 593
IPR032867 DYW_dom 629 721
IPR002885 Pentatricopeptide_rpt 314 361
IPR002885 Pentatricopeptide_rpt 213 259
IPR002885 Pentatricopeptide_rpt 414 461
IPR002885 Pentatricopeptide_rpt 113 158
IPR002885 Pentatricopeptide_rpt 292 313
No external refs found!