Lsat_1_v5_gn_3_38341.1

Description : not classified

Gene families : OG0000678 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000678_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_38341.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_12

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_3_36980.1	SMC1, ATSMC1, TTN8	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_37141.1	AtGRF1, GRF1	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000916	Bet_v_I/MLP	3	150

External Links

No external refs found!