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  5. Lsat_1_v5_gn_3_34281.1

Lsat_1_v5_gn_3_34281.1


Description : not classified


Gene families : OG0032980 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_34281.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_66


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006974 DNA damage response IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0048478 obsolete replication fork protection IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005750 mitochondrial respiratory chain complex III IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031262 Ndc80 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045275 respiratory chain complex III IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070469 respirasome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0180019 Knl1/Spc105 complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012923 Csm3 81 162
IPR001878 Znf_CCHC 13 29
No external refs found!