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  5. Lsat_1_v5_gn_3_16881.1

Lsat_1_v5_gn_3_16881.1


Description : not classified


Gene families : OG0000056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_16881.1

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_157381.1 PRK1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 91 151
IPR001611 Leu-rich_rpt 821 880
IPR001611 Leu-rich_rpt 517 576
IPR013210 LRR_N_plant-typ 721 757
IPR001611 Leu-rich_rpt 454 469
IPR001611 Leu-rich_rpt 794 808
No external refs found!