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  5. Lsat_1_v5_gn_2_99701.1

Lsat_1_v5_gn_2_99701.1 (ARC2, CH-CPN60A, SLP,...)


Aliases : ARC2, CH-CPN60A, SLP, CPN60A, Cpn60alpha1, CPNA1

Description : subunit alpha of Cpn60 chaperonin complex. subunit alpha of CPN60 assembly chaperone heterodimer. chaperone *(Hsp60)


Gene families : OG0000641 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_99701.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Bra011985 ARC2, CH-CPN60A,... chaperone *(Hsp60). subunit alpha of CPN60 assembly... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra034383 ARC2, CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. chaperone... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004097 catechol oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004619 phosphoglycerate mutase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005747 mitochondrial respiratory chain complex I IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006006 glucose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006007 glucose catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030964 NADH dehydrogenase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045271 respiratory chain complex I IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 70 572
No external refs found!