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  5. Lsat_1_v5_gn_2_98541.1

Lsat_1_v5_gn_2_98541.1 (PIP2;1, AtPIP2;1, PIP2A, PIP2)


Aliases : PIP2;1, AtPIP2;1, PIP2A, PIP2

Description : plasma membrane intrinsic protein *(PIP)


Gene families : OG0000459 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_98541.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Bra005216 PIP2;2, PIP2B plasma membrane intrinsic protein *(PIP) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra006997 PIP2;1,... plasma membrane intrinsic protein *(PIP) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000425 MIP 29 264
No external refs found!