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  5. Lsat_1_v5_gn_2_70980.1

Lsat_1_v5_gn_2_70980.1


Description : not classified


Gene families : OG0002421 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002421_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_70980.1


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 515 576
IPR002885 Pentatricopeptide_rpt 175 205
IPR002885 Pentatricopeptide_rpt 206 232
IPR002885 Pentatricopeptide_rpt 300 329
IPR002885 Pentatricopeptide_rpt 373 393
IPR002885 Pentatricopeptide_rpt 237 264
IPR002885 Pentatricopeptide_rpt 473 497
IPR002885 Pentatricopeptide_rpt 51 79
IPR002885 Pentatricopeptide_rpt 82 111
IPR002885 Pentatricopeptide_rpt 268 296
IPR002885 Pentatricopeptide_rpt 113 143
IPR002885 Pentatricopeptide_rpt 144 172
IPR002885 Pentatricopeptide_rpt 397 444
IPR032867 DYW_dom 616 708
No external refs found!