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  5. Lsat_1_v5_gn_2_70401.1

Lsat_1_v5_gn_2_70401.1


Description : not classified


Gene families : OG0003198 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_70401.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_135


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030976 thiamine pyrophosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 98 421
No external refs found!