1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_2_5601.1

Lsat_1_v5_gn_2_5601.1 (NdhK, PSBG)


Aliases : NdhK, PSBG

Description : component *(NdhK) of NDH subcomplex A


Gene families : OG0002478 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_5601.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0091.00043 NdhK, PSBG component *(NdhK) of NDH subcomplex A 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0091.00044 NdhK, PSBG component *(NdhK) of NDH subcomplex A 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03673 NDHC component *(NdhC) of NDH membrane subcomplex M 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034220 monoatomic ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072521 purine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098655 monoatomic cation transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001268 NADH_UbQ_OxRdtase_30kDa_su 247 319
IPR006137 NADH_UbQ_OxRdtase-like_20kDa 46 149
No external refs found!