Lsat_1_v5_gn_2_5601.1 (NdhK, PSBG)

Aliases : NdhK, PSBG

Description : component *(NdhK) of NDH subcomplex A

Gene families : OG0002478 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002478_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_5601.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
Spov3_C0091.00043	NdhK, PSBG	component *(NdhK) of NDH subcomplex A	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0091.00044	NdhK, PSBG	component *(NdhK) of NDH subcomplex A	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03673	NDHC	component *(NdhC) of NDH membrane subcomplex M	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEA	Interproscan
MF	GO:0009055	electron transfer activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	IEA	Interproscan
MF	GO:0051540	metal cluster binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006163	purine nucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009117	nucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009259	ribonucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016168	chlorophyll binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019693	ribose phosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046034	ATP metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072521	purine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001268	NADH_UbQ_OxRdtase_30kDa_su	247	319
IPR006137	NADH_UbQ_OxRdtase-like_20kDa	46	149

External Links

No external refs found!

Lsat_1_v5_gn_2_5601.1 (NdhK, PSBG)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation