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  5. Lsat_1_v5_gn_2_5500.1

Lsat_1_v5_gn_2_5500.1 (MSL5)


Aliases : MSL5

Description : mechanosensitive ion channel *(MSL)


Gene families : OG0003593 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003593_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_5500.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_136


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008131 primary amine oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006685 MscS_channel_2nd 572 777
No external refs found!