Lsat_1_v5_gn_2_54001.1 (TMO6, DOF5.3)

Aliases : TMO6, DOF5.3

Description : transcription factor *(DOF)

Gene families : OG0043559 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_54001.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_149

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006073	obsolete cellular glucan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006364	rRNA processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016072	rRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0017038	protein import	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	14	67

External Links

No external refs found!

Lsat_1_v5_gn_2_54001.1 (TMO6, DOF5.3)

Expression Profile

Co-expression Networks

Functional Annotation