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  5. Lsat_1_v5_gn_2_30320.1

Lsat_1_v5_gn_2_30320.1 (TPS-CIN, ATTPS-CIN, TPS27)


Aliases : TPS-CIN, ATTPS-CIN, TPS27

Description : EC_4.2 carbon-oxygen lyase. mono-/sesquiterpene-/diterpene synthase


Gene families : OG0009370 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_30320.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_26


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005750 mitochondrial respiratory chain complex III IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006952 defense response IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045275 respiratory chain complex III IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070469 respirasome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 178 440
IPR001906 Terpene_synth_N 8 146
No external refs found!