Lsat_1_v5_gn_2_21740.1 (DKM, bZIP30)

Aliases : DKM, bZIP30

Description : recombination mediator *(Whirly)

Gene families : OG0000164 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_21740.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_57

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_6_36400.1	DKM, bZIP30	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015693	magnesium ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016307	obsolete phosphatidylinositol phosphate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0040008	regulation of growth	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045927	positive regulation of growth	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013742	Whirly	179	235
IPR003151	PIK-rel_kinase_FAT	246	303

External Links

No external refs found!

Lsat_1_v5_gn_2_21740.1 (DKM, bZIP30)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation