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  5. Lsat_1_v5_gn_2_135660.1

Lsat_1_v5_gn_2_135660.1 (VPS35C)


Aliases : VPS35C

Description : not classified


Gene families : OG0000050 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_135660.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_246

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_2_18240.1 MCTP5 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006013 mannose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006189 'de novo' IMP biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015977 carbon fixation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!