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  5. Lsat_1_v5_gn_2_106801.1

Lsat_1_v5_gn_2_106801.1 (VFB2)


Aliases : VFB2

Description : not classified


Gene families : OG0000167 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_106801.1

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_2_122301.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEA Interproscan
BP GO:0006096 glycolytic process IEA Interproscan
BP GO:0006400 tRNA modification IEA Interproscan
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001576 Phosphoglycerate_kinase 87 450
IPR003358 tRNA_(Gua-N-7)_MeTrfase_Trmb 487 660
No external refs found!