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  5. Lsat_1_v5_gn_2_106641.1

Lsat_1_v5_gn_2_106641.1


Description : not classified


Gene families : OG0006571 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_106641.1


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 245 289
IPR002885 Pentatricopeptide_rpt 560 607
IPR002885 Pentatricopeptide_rpt 386 434
IPR002885 Pentatricopeptide_rpt 490 538
IPR002885 Pentatricopeptide_rpt 316 364
IPR002885 Pentatricopeptide_rpt 452 484
IPR002885 Pentatricopeptide_rpt 214 243
IPR002885 Pentatricopeptide_rpt 145 172
No external refs found!