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  5. Lsat_1_v5_gn_2_100461.1

Lsat_1_v5_gn_2_100461.1


Description : not classified


Gene families : OG0003070 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_100461.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_92


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004652 obsolete polynucleotide adenylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005672 transcription factor TFIIA complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032977 membrane insertase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043631 obsolete RNA polyadenylation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140597 protein carrier chaperone IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007877 DUF707 66 352
No external refs found!