Lsat_1_v5_gn_1_97741.1 (L18aB, RPL18aB)

Aliases : L18aB, RPL18aB

Description : catalytic protein *(MraY) of GlcNAc:UDP-N-acetylmuramic acid pentapeptide-PP-undecaprenol formation. component *(eL20) of large ribosomal-subunit (LSU) proteome

Gene families : OG0001499 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001499_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_97741.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_165

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003872	6-phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003876	AMP deaminase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006188	IMP biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006534	cysteine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006563	L-serine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006629	lipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008374	O-acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008443	phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009611	response to wounding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016407	acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016412	serine O-acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016413	O-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019239	deaminase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019344	cysteine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030414	peptidase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032261	purine nucleotide salvage	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032264	IMP salvage	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043094	cellular metabolic compound salvage	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043101	purine-containing compound salvage	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043173	nucleotide salvage	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046040	IMP metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046855	obsolete inositol phosphate dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0047623	adenosine-phosphate deaminase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0061134	peptidase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0061135	endopeptidase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0106380	purine ribonucleotide salvage	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0120227	acyl-CoA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901567	fatty acid derivative binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR023573	Ribosomal_eL20_dom	455	566
IPR000715	Glycosyl_transferase_4	260	427

External Links

No external refs found!

Lsat_1_v5_gn_1_97741.1 (L18aB, RPL18aB)

Expression Profile

Co-expression Networks

Functional Annotation