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  5. Lsat_1_v5_gn_1_87921.1

Lsat_1_v5_gn_1_87921.1


Description : not classified


Gene families : OG0001283 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001283_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_87921.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_95921.1 PCP-like, SME2 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 136 245
No external refs found!