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  5. Lsat_1_v5_gn_1_54041.1

Lsat_1_v5_gn_1_54041.1 (IMPA-9)


Aliases : IMPA-9

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)


Gene families : OG0003431 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_54041.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_237


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000492 box C/D snoRNP assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005956 protein kinase CK2 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031011 Ino80 complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0097346 INO80-type complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000225 Armadillo 378 415
IPR000225 Armadillo 200 237
IPR000225 Armadillo 118 156
IPR000225 Armadillo 344 374
No external refs found!