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  5. Lsat_1_v5_gn_1_43600.1

Lsat_1_v5_gn_1_43600.1 (AGL78)


Aliases : AGL78

Description : not classified


Gene families : OG0002360 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002360_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_43600.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_136


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 426 506
IPR003340 B3_DNA-bd 293 377
IPR003340 B3_DNA-bd 150 228
IPR003340 B3_DNA-bd 16 89
No external refs found!