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  5. Lsat_1_v5_gn_1_41920.1

Lsat_1_v5_gn_1_41920.1 (MEF13)


Aliases : MEF13

Description : RNA editing factor *(MEF13)


Gene families : OG0017129 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_41920.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_135


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 727 752
IPR002885 Pentatricopeptide_rpt 425 449
IPR002885 Pentatricopeptide_rpt 91 116
IPR002885 Pentatricopeptide_rpt 526 550
IPR002885 Pentatricopeptide_rpt 353 376
IPR046849 Eplus_motif 838 864
IPR046848 E_motif 772 832
IPR002885 Pentatricopeptide_rpt 248 296
IPR002885 Pentatricopeptide_rpt 553 600
IPR002885 Pentatricopeptide_rpt 451 498
IPR002885 Pentatricopeptide_rpt 652 700
IPR002885 Pentatricopeptide_rpt 147 193
No external refs found!