Lsat_1_v5_gn_1_39601.1 (PGDH2, PGDH)

Aliases : PGDH2, PGDH

Description : EC_1.1 oxidoreductase acting on CH-OH group of donor. phosphoglycerate dehydrogenase

Gene families : OG0040222 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_39601.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_51

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0051287	NAD binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006259	DNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006284	base-excision repair	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006974	DNA damage response	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR045626	PGDH_ASB_dom	400	486
IPR002912	ACT_dom	547	608
IPR006140	D-isomer_DH_NAD-bd	182	356
IPR006139	D-isomer_2_OHA_DH_cat_dom	80	388

External Links

No external refs found!