Lsat_1_v5_gn_1_38720.1 (PETA)

Aliases : PETA

Description : apocytochrome f component *(PetA) of cytochrome b6/f complex

Gene families : OG0001102 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_38720.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
Bra041106	PETA	apocytochrome f component *(PetA) of cytochrome b6/f complex	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0091.00040	PETA	apocytochrome f component *(PetA) of cytochrome b6/f...	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01455	PETA	apocytochrome f component *(PetA) of cytochrome b6/f complex	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0020037	heme binding	IEA	Interproscan
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042651	thylakoid membrane	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009512	cytochrome b6f complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016168	chlorophyll binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016854	racemase and epimerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002325	Cyt_f	180	298
IPR024094	Cyt_f_lg_dom	14	168

External Links

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Lsat_1_v5_gn_1_38720.1 (PETA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation