Lsat_1_v5_gn_1_28940.1


Description : not classified


Gene families : OG0009279 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_28940.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_124


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004357 glutamate-cysteine ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006597 Sel1-like 175 204
IPR006597 Sel1-like 135 173
IPR002893 Znf_MYND 275 315
No external refs found!